GenePattern Team Blog


Workarounds to Install and Run a GenePattern Server on Mac OS X 10.9 Mavericks

Posted on Wednesday, May 07, 2014 at 05:49PM by David Eby

In a previous blog post we gave some limited instructions for using GenePattern with Mac OS X 10.9 Mavericks.  While accessing the public server via web browser is not an issue, installing and running your own GenePattern server is a different matter.  Issues with the installer, server launcher, and …

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GenePattern 3.8.1

Posted on Thursday, April 17, 2014 at 05:29PM by GenePattern Team

GenePattern 3.8.1 has been released! 3.8.1 (build 13243)  is available for use on our Public GenePattern Server,  via download and as an Amazon Machine Image (AMI)

New features include:

  • A new file uploader, replacing the Java-Applet-based file uploader with a new html5/JavaScript file uploader
  • New …

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GenePattern 3.8.0

Posted on Wednesday, February 12, 2014 at 04:42PM by GenePattern Team

GenePattern 3.8.0 has been released! 

3.8.0 (build 12839)  is available for use on our Public GenePattern Server,  via download and as an Amazon Machine Image (AMI)

New features include:

  • An updated User Interface
  • New and improved Modules & Pipelines Pane
  • Pinning favorite modules
  • Running a batch job …

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Java 7 update 51 blocks GenePattern visualizers

Posted on Tuesday, January 21, 2014 at 04:37PM by David Eby

UPDATE MARCH 17, 2017 : Java applet visualizers no longer work in any browser. Please click here to read the blog post.


A new Java update (7u51) was released by Oracle a week ago and - as has been the pattern with other recent updates - once again tightens security on applets run …

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GenePattern server coverage December 23 - January 2

Posted on Thursday, December 19, 2013 at 12:41PM by GenePattern Team

From December 21 to January 1, the GenePattern team will be unavailable due to the year-end closing of the Broad Institute.  During this time, the GenePattern servers and repositories (including GParc) will remain up and fully functional. We will be monitoring this daily and, should anything happen to disrupt service …

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