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Modules in the repository can be installed on a local GenePattern server. Most of these modules are also installed on the public GenePattern server.
| Name | Type | Availability | ConsensusClustering Resampling-based clustering method
Version: 7.2 |
Clustering | Module Repository | HierarchicalClustering Perform hierarchical clustering on samples (columns) or/and genes (rows).
Version: 7.14 |
Clustering | Module Repository | KMeansClustering Module that performs the K-Means Clustering algorithm
Version: 2 |
Clustering | Module Repository | NMFConsensus Non-negative Matrix Factorization (NMF) Consensus Clustering
Version: 5 |
Clustering | Module Repository | SOMClustering Self-Organizing Maps algorithm
Version: 2 |
Clustering | Module Repository | SparseHierarchicalClustering Cluster the samples in a data matrix using an adaptively-chosen subset of the features.
Version: 1 |
Clustering | Module Repository | SubMap Maps subclasses between two data sets
Version: 4 |
Clustering | Module Repository | SubMapBrowser Surveys all possible subclass mappings
Version: 2 |
Clustering | Module Repository |
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