GenePattern Team Blog


Changes to Startup Env Impact R Modules on Broad Hosted Servers

Posted on Thursday, September 18, 2014 at 04:52PM by Peter Carr

As a result of the software update on August 14, we modified the startup environment for the server. This was necessary because the server now requires Java 7. It was previously using Java 6. Surprisingly, this necessitated a change to the R configuration. You may notice slight changes to the …

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Upcoming GenePattern Downtime

Posted on Wednesday, July 23, 2014 at 12:56PM by GenePattern Team

GenePattern downtime 7/25 - 7/28: Because of systems maintenance at the Broad, the following job queue interruptions will take place between 5 PM on Friday, July 25 and 10 AM Monday, July 28.

Timeline:

  • 5 PM Friday, July 25 - The job queue will be suspended. All new job submissions …

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GenePattern 3.8.2

Posted on Wednesday, June 25, 2014 at 11:46AM by Barbara Hill Meyers

GenePattern 3.8.2 has been released! 3.8.2 (build 13519)  is available for use on our Public GenePattern Server,  via download and as an Amazon Machine Image (AMI)

New features include:

  • Improved file management in the Jobs and Files tabs; most notably, the ability to save your result …

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Visualizers fixed for Java 7

Posted on Tuesday, June 17, 2014 at 04:50PM by David Eby

UPDATE MARCH 17, 2017 : Java applet visualizers no longer work in any browser. Please click here to read the blog post.


Visualizers fixed for Java 7: If you have been following this blog, you will have seen the series of posts detailing workarounds for visualizer issues caused by Java updates …

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Java 7 Update 55 Blocks visualizers on Windows

Posted on Tuesday, May 27, 2014 at 04:35PM by Barbara Hill Meyers

UPDATE MARCH 17, 2017 : Java applet visualizers no longer work in any browser. Please click here to read the blog post.


Java  7 update 55 and Windows: We have been receiving reports from our users and have ourselves noticed that the latest Java 7 update (Java 7 update 55) has …

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